Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890935.1_cds_XP_016445630.1_40573
CDS Infomation

[gene=LOC107770814] [db_xref=GeneID:107770814] [protein=galactan beta-1,4-galactosyltransferase GALS3-like] [protein_id=XP_016445630.1] [location=join(4509..5662,6897..7242)] [gbkey=CDS]
Sequence

ATGACTACTAAAGAGAAAGAGCGGAAGATGTTCGTTGGCGTTGTTTGGAATTGTGCTGCT
GAGCTCAAATTCCTCCTCACTGCTCTTCTCTTTCTCTGTTCCCTCATCACCCTTCTTCAC
TTCCTCCCTTCTCGCTTCTCTTTCTCTCCTTATTCCGATCTTACCACCAACTGTCTTTCT
ACTCCACTTCACTCCGTTTCCCATTTCAACGCTACTAATTATTCATCTGCTCTACCACCA
CCCCCTCCTCCGCCTTCCTTGGACAAAGACCGACTGCTTGAAAACGGCGTCGTTAAGAGA
GCTTTCAACCCATTTGGCTCGGCTGCCTACAACTTCATTCTAATGTCCGCTTACAGAGGA
GGTTATAACACTTTTGCCGTAATGGGTTTAGCTTCAAAGCCCCTCCACGTATACGGCAAA
CCCAGCTACTTATGCGAGTGGGTCCCATTTAACAAAAACCAAAACTCCATCTCTGTCGCT
GGTCACAAAATCCTCCCTGACTGGGGCTACGGCAGGGTTTACACTGCCCTAGTCATCAAC
TGCACTTTCCCCGTCCCCGTCGGCGATGACGGCGGAAAACTCCTCATTCACGCCGCCACC
AACGGCGGCGGCGACACTAAATTTAACACCACCGACACTTTTGAAGCCTTAACGGAAACG
GGAGAGGGTTTTATTAACTTTACTTCAACATTCAAAAACCCACCTAAATATGATTTTCTA
TATTGTGGTTCGTCACTGTACGGGAACTTGAGCCCGCAGAGAGTACGAGAATGGTTAGCA
TTTCACGTGAGGCTGTTCGGTGAAAAATCTCATTTCGTAATCCACGATGCTGGGGGTATA
CACGAGGGGGTAATGGAGGTGTTAAAGCCATGGATGGATAAAGGATACGTGACATTACAG
GATATTAGGGATCAAGAGAGATTTGATGGATACTATCATAATCAGTTCCTTATTGTGAAT
GACTGTTTACATAGGTATAAGTTTCAAGCTAAATGGATGTTCTTCTTTGATGTGGATGAG
TTCATTTTTGTGCCTAAAAAGAGTACTATTAAGTCTGTGGTTGATTCGTTATCGGATTAT
ACACAATTTACCATTGAGCAGATGCCTATGTCGAACAAGCTTTGTCTCTCTGAGGACCGC
GGTAAATCCTACAGAAAATGGGGGTTCGAGAAGCTAGTGTACAAGGACGTGAAGAGGGGA
ATTAGGAGGGATCGGAAATATGCAGTGCAACCTCGCAATGTAATAGCCACTGGTGTGCAT
ATGTCCCAGAACACAGTAGGCAAGACGACACACAAGACAGAAGGGCGTATCAAGTATTTC
CACTATCACGGGACCATTGCAGAGCGCCGGGAGCCATGCCGACAGCTGGTCAACGCCACT
TCAATCACAGTTGAAGGTACCCCTTATATTGTGGATACCACAATGAGGGATATTGCTGCA
ACTGTAAAGAGATTCGAACTCAAGATGATTGGCTCTACATTACAAAGAACGCGGCAATGA

Peptide Sequence

PEP ID

XP_016445630.1
PEP Infomation

PREDICTED: galactan beta-1,4-galactosyltransferase GALS3-like [Nicotiana tabacum]
Sequence

MTTKEKERKMFVGVVWNCAAELKFLLTALLFLCSLITLLHFLPSRFSFSPYSDLTTNCLS
TPLHSVSHFNATNYSSALPPPPPPPSLDKDRLLENGVVKRAFNPFGSAAYNFILMSAYRG
GYNTFAVMGLASKPLHVYGKPSYLCEWVPFNKNQNSISVAGHKILPDWGYGRVYTALVIN
CTFPVPVGDDGGKLLIHAATNGGGDTKFNTTDTFEALTETGEGFINFTSTFKNPPKYDFL
YCGSSLYGNLSPQRVREWLAFHVRLFGEKSHFVIHDAGGIHEGVMEVLKPWMDKGYVTLQ
DIRDQERFDGYYHNQFLIVNDCLHRYKFQAKWMFFFDVDEFIFVPKKSTIKSVVDSLSDY
TQFTIEQMPMSNKLCLSEDRGKSYRKWGFEKLVYKDVKRGIRRDRKYAVQPRNVIATGVH
MSQNTVGKTTHKTEGRIKYFHYHGTIAERREPCRQLVNATSITVEGTPYIVDTTMRDIAA
TVKRFELKMIGSTLQRTRQ

Transcript Sequence

Gene sequence data has not been registered.